Tripal
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Contents:
Install Tripal
Building your Site
Guiding your Users
Site Administration
Extending Tripal
Object-Oriented Development
Controlled Vocabularies (CVs)
Biological Data Storage
Custom Module Development
Automated Testing
Hands-On Training
Upgrading Tripal
Contributing to Core Tripal
Design Documentation
Tripal
Extending Tripal
Edit on GitHub
Extending Tripal
Contents:
Object-Oriented Development
Controlled Vocabularies (CVs)
How are CVs used in Tripal?
Identifying a CVTerm
Retrieving Tripal Terms
Chado CV module
Biological Data Storage
Tripal DBX: Generic cross database support for Drupal
GMOD Chado Schema Integration
Bulk Schema Install for PostgreSQL
Custom Tables in Chado
Creating a Chado Data Importer
Custom Module Development
Module File Structure
Menus, Links and URLs
Pages and Page Types
Fields (content building blocks)
Forms (user input)
Error Reporting and Logging
Views (content listings)
Configuration Variables
Theme (display)
Caching (performance)
Alternate Database Backends
Automated Testing
How run automated tests locally
Tripal-focused Testing
Additional Resources
Hands-On Training
How to use Custom Tables in Chado
Read the Docs
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